3 0 0 5 2 <<< Number of loci, risk locus, sexlinked (1), program , # null loci
0 0.0 0.0 0  << Mut Locus, Mut Rate, Haplotype Frequencies (if 1)  MLINK
1 2 3
4 2    <<- null locus, number of alleles
  0.97000 0.03000
4 2    <<- null locus, number of alleles
  0.99000 0.01000
  1    <<- number of liability classes
  0.000 0.000 0.000
  0.000 0.000 0.000
  0.000 0.000 1.000
3 4   << Allele numbers, Number of alleles
  0.25000 0.25000 0.25000 0.25000
 0 0  << Sex Difference, Interference (If 1 or 2)  
 0.50000 0.00000 << Recombination Values 
 2 0.10000 0.40000 << Rec. varied, Increment, Finishing value